Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824580.1_cds_XP_016502005.1_15689
CDS Infomation

[gene=LOC107820257] [db_xref=GeneID:107820257] [protein=B3 domain-containing transcription factor VRN1-like] [protein_id=XP_016502005.1] [location=complement(join(64678..64929,65065..65448,65554..65732,65843..66296,66867..66986))] [gbkey=CDS]
Sequence

ATGGCAGCTAAGTCCCACCTGCAAAGTGGTGAAAGCTCTTCCAATTGGAAGTCTTCTACT
AACATTACTCAACCCAAGTTCTTCAAGATTATATTATCCCAACATGAATGCAGCCGTCTG
AGGATTCCAGAAGACTTTGCGAGCAGATATTGCAAGAACATGCTAAACCCTGTGTATCTT
GAGGTTCCAAGTGGAGACGTATGGGAGGTTGAAGTGGTTCATTCTCAAGGCCAAATTTGT
CTTGGCATTGGATGGCAAGATTTCAGTGACTTCTATTCAATAAGCTGCGGCCACTTTTTG
ATGTTTGGATACAATGCTCGTTCCCATTTTAATGTCACTATATTTGATTTGAGTGCTTCA
GAAATTGAATATCCAACAAAAGAGATTGAGTCGGATGATTCCATAGATATTTCGGATGTG
GCTGAGCATTCTGTTGAAAATCTGAGCCATGGTCCCTTAGGCCAGGAGAGAAAAAGAAAA
AGACAAGAAGGGGAAGCAGAGGATGATATTCCAGTTAACGTTCAAACTAAAGTAATCGAG
GAAGAAGAGTCTCAAGGGAATGTAGTTTCACTAGAAAGAAGCGAAGGCTGTAGGGAGCAG
GAGCAACAATCCAACATTTTTACCAGTAAGAGCGACGCAGAGAGGGACGAAGAGAGAGCT
GAAAACTATCAAAGTGCAAAAGCTTTTAAATCTAAGAACCCATTCATTATATCTTTTATG
CATCCATCATATGTCACGAGACCACACAGTCTGTCCATACCGTTGAAATTTGCTCGGAAG
TATTTCATGCAGAACCGTGGCAAGTTAGTGCTTCGTGTTCCAGGAAGTGGATTTTGGACT
GTCAAATGCACTTTACGAACGAGAAATGCTAAATTTACTTGTGGATGGAAGGCATTCGTC
CTGGACAATAAGTTAAAATCTGGTGATGTTTGTGTCCTCGAAGTGATTAAAGACACTAAG
CTCTTATTGATAGATGTCACCATATTTCCAGGGGTTTCTGATAGTACAAACGAGTCTATC
AACGCTGAGGCTTCAGTTCCATGTTCCCCAGCCTATCAAAGAGCAAAAGCTTTTACGTCT
GAAAATCCATTCTTCATATATCCTATGCAGCCATCATATGTTTCTGGCCCCTCATTGACC
ATATCACGGGTGATTGCTAGTAAATTTTTCCCCACTAGATATAGCAATGTGGTGCTTCAA
GTTCCAAACAAGAGATCATGGGCTTTGAATTGCACTGTTGGAACAAAAAATGGTAGGTTG
AATTCAGGTTGGAAGAAGTTTGTGCAGGACAATAACATAAAAGTAGGTGATGTTTGTGTC
TTCGAACAGGTTAGTAGAACCAAATTTTTATTCAATGTCTACATATTTCCTGCAGTCGAA
GGTGTGTGA

Peptide Sequence

PEP ID

XP_016502005.1
PEP Infomation

PREDICTED: B3 domain-containing transcription factor VRN1-like [Nicotiana tabacum]
Sequence

MAAKSHLQSGESSSNWKSSTNITQPKFFKIILSQHECSRLRIPEDFASRYCKNMLNPVYL
EVPSGDVWEVEVVHSQGQICLGIGWQDFSDFYSISCGHFLMFGYNARSHFNVTIFDLSAS
EIEYPTKEIESDDSIDISDVAEHSVENLSHGPLGQERKRKRQEGEAEDDIPVNVQTKVIE
EEESQGNVVSLERSEGCREQEQQSNIFTSKSDAERDEERAENYQSAKAFKSKNPFIISFM
HPSYVTRPHSLSIPLKFARKYFMQNRGKLVLRVPGSGFWTVKCTLRTRNAKFTCGWKAFV
LDNKLKSGDVCVLEVIKDTKLLLIDVTIFPGVSDSTNESINAEASVPCSPAYQRAKAFTS
ENPFFIYPMQPSYVSGPSLTISRVIASKFFPTRYSNVVLQVPNKRSWALNCTVGTKNGRL
NSGWKKFVQDNNIKVGDVCVFEQVSRTKFLFNVYIFPAVEGV

Transcript Sequence

Gene sequence data has not been registered.